Abstract
The Corona Virus Disease-2019 (COVID-19) pandemic gives a challenge for scientist to develop the most promising drug candidate from every potential natural product, including marine biodiversity. Marine natural products have rarely explored since the difficulties in the sample collection. In this study, we reported the isolation of marine sponge Halichondriidae sp. from the Kangean Islands using ethyl acetate as a solvent. The profiling of the ethyl acetate fractions leading to the presence of aliphatic and aromatic hydrocarbon with specific functional groups, such as, amines, alcohols, amides, carbonyls, and halides. further analysis using LC-ESI-MS/MS showed the presence of 4-(1,3-Dibenzyl-2-imidazolidinyl)-N,N-dimethylaniline as the main compound. The other is 4-{7-[2-hydroxy-2-(4-nitrophenyl)ethyl]-3-methyl-2,6-dioxo-1,2,3,6,7,9-hexahydro-8H-purine-8-ylidene}morpholin-4-ium, erucamide, nepafenac, 1-benzofuran-2-carbonitrile, 1,3-dibenzyl-2-(6-methyl-2-pyridinyl)hexahydropyrimidine, N,N,N-Tributyl-1-butanaminium-2-hydroxypropanoate, (±)-anabasine, benzyl urea, tert-butyl isopropylcarbamate, 3-(4-Hexylcyclohexyl)-5-undecyl-1,2,4-oxadiazole and 2-[(2E)-2-octadecen-1-yl]succinic acid. Molecular docking analysis using 7L0N as one of COVID-19 receptor with 4-{7-[2-Hydroxy-2-(4-nitrophenyl) ethyl]-3-methyl-2,6-dioxo-1,2,3,6,7,9-hexahydro-8H-purin-8-ylidene} morpholin-4-ium suggested the lowest binding energy is -6.277±0.04726 kcal/mol. The dominan interaction of the receptor and ligand are hydrogen bonding, hydrophobic bond from ?-alkyl interaction, hydrogen-carbon interactions and Van der Waals interactions.
| Original language | English |
|---|---|
| Article number | 080004 |
| Journal | AIP Conference Proceedings |
| Volume | 2818 |
| Issue number | 1 |
| DOIs | |
| Publication status | Published - 21 Aug 2023 |
| Event | 3rd International Conference on Chemistry and Material Science, IC2MS 2021 - Virtual, Online, Indonesia Duration: 12 Oct 2021 → 13 Oct 2021 |
UN SDGs
This output contributes to the following UN Sustainable Development Goals (SDGs)
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SDG 14 Life Below Water
Keywords
- corona virus disease-2019 (COVID-19)
- Halichondriidae
- marine sponge
- molecular docking
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